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This was originally reported over 3 months ago, still no working fix it seems. I also have this issue, in addition I have noticed random notifications will be generated from users and sent to others with who they have had no interactions with, I have found this to be related to when admins delete an activity stream item or comment - I am still trying to find an exact reproduce for this, but it is happening regularly.
I mentioned this bug elsewhere on the community and was informed by Sinisia that it's not possible to fix in 3.2 due to how notifications direct to a users profile and that it will be resolved in 3.3 as activity streams from notifications will be moving to a separate page - now we are moving to 4.0 with no time frame I find this bug completely unacceptable.
i am receiving daily complaints and messages from confused users who are constantly getting notifications, only when clicking them are informed "content not found".
The answer Sinisa gave you is correct, it isn't that we are not interested in fixing the bug. With the design of the current code it is not possible to correct it. The new code in 4 will resolve it. Jomsocial 4 is expected in the begining of 2015.
Can I assume they will never be able to resolve it even though they last posted a fix yesterday?
It's very confusing with conflicting messages everywhere. I find it unacceptable to have this bug for over 3 months and now having to wait until the release of Jomsocial 4 for it to be resolved (hopefully). This bug formed when the new "like comment" feature was introduced, can a developer provide a hack to remove that feature temporarily, this is having a major impact and it seems like Jomsocial couldn't care less.
Please don't mark this thread as a customer issue, it's a confirmed bug.
The fix has now been given to the customer in his thread and we are waiting for conformation that it's fixed. This thread has 5 issues reported in it. I can't discuss another users thread with multiple issues in it because even though the fault may seem the same the cause may be different on your site.
If you are experiencing the same issue then you can try the fix provided or create a new post describing the issue you are having, provide site access so we can look at it happening on your site then we can provide you with the fix.
Alternatively the fix will be included in Jomsocial 4